PH01002060G0210's details annotation
1.Annotation
ICBR annotation: CAAX amino terminal protease family protein, putative, expressed
Blast result AT2G36305 : 3.50E-47
Blast annotation: farnesylated protein-converting enzyme 2
2.Location
Scaffold: PH01002060
Strand: +
| Region | Start | End |
| gene | 133494 | 139521 |
| mRNA | 133494 | 139521 |
| exon | 133494 | 134407 |
| exon | 134508 | 134570 |
| exon | 134674 | 134865 |
| exon | 135322 | 135433 |
| exon | 136236 | 136298 |
| exon | 138268 | 139521 |
| CDS | 134204 | 134407 |
| CDS | 134508 | 134570 |
| CDS | 134674 | 134865 |
| CDS | 135322 | 135433 |
| CDS | 136236 | 136298 |
| CDS | 138268 | 138359 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02517.15 | Abi | 146 | 215 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Terpenoid backbone biosynthesis | prenyl protein peptidase [EC:3.4.22.-] | ko00900 | K08658 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.