PH01002131G0320's details annotation
1.Annotation
ICBR annotation: zinc finger DHHC domain-containing protein, putative, expressed
Blast result AT3G26935 : 1.10E-68
Blast annotation: DHHC-type zinc finger family protein
2.Location
Scaffold: PH01002131
Strand: +
| Region | Start | End |
| gene | 230612 | 235820 |
| mRNA | 230612 | 235820 |
| exon | 230612 | 232173 |
| exon | 233342 | 233397 |
| exon | 233593 | 233775 |
| exon | 234024 | 234329 |
| exon | 234827 | 235820 |
| CDS | 232041 | 232173 |
| CDS | 233342 | 233397 |
| CDS | 233593 | 233775 |
| CDS | 234024 | 234329 |
| CDS | 234827 | 235348 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01529.19 | DHHC | 186 | 232 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008270 | zinc ion binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.