Annotation of co-expression genes

PH01002141G0160's details annotation

1.Annotation

ICBR annotation: fructose-1,6-bisphosphatase, putative, expressed

Blast result AT5G64380 : 1.00E-144
Blast annotation: Inositol monophosphatase family protein

2.Location

Scaffold: PH01002141
Strand: +

RegionStartEnd
gene121911124449
mRNA121911124449
exon121911122964
exon123485124449
CDS122694122964
CDS123485123885

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist 		Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist 		Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
PF00316.19FBPase77256

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
Glycolysis / Gluconeogenesisfructose-1,6-bisphosphatase I [EC:3.1.3.11]ko00010K03841
Pentose phosphate pathwayfructose-1,6-bisphosphatase I [EC:3.1.3.11]ko00030K03841
Fructose and mannose metabolismfructose-1,6-bisphosphatase I [EC:3.1.3.11]ko00051K03841
Carbon fixation in photosynthetic organismsfructose-1,6-bisphosphatase I [EC:3.1.3.11]ko00710K03841
Methane metabolismfructose-1,6-bisphosphatase I [EC:3.1.3.11]ko00680K03841

10.Gene Ontology

GO AccessionGO Annotation
GO:0005975carbohydrate metabolic process
GO:0042132fructose 1,6-bisphosphate 1-phosphatase activity
GO:0042578phosphoric ester hydrolase activity

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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