PH01002146G0070's details annotation
1.Annotation
ICBR annotation: GLTP domain containing protein, putative, expressed
Blast result AT4G39670 : 6.20E-50
Blast annotation: Glycolipid transfer protein (GLTP) family protein
2.Location
Scaffold: PH01002146
Strand: -
| Region | Start | End |
| gene | 42839 | 47919 |
| mRNA | 42839 | 47919 |
| exon | 42839 | 43573 |
| exon | 43746 | 43888 |
| exon | 44204 | 44376 |
| exon | 47020 | 47919 |
| CDS | 43467 | 43573 |
| CDS | 43746 | 43888 |
| CDS | 44204 | 44376 |
| CDS | 47020 | 47178 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08718.10 | GLTP | 50 | 156 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005737 | cytoplasm |
| GO:0017089 | glycolipid transporter activity |
| GO:0046836 | glycolipid transport |
| GO:0051861 | glycolipid binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.