Gene details

Annotation of co-expression genes

PH01002260G0290's details annotation

1.Annotation

ICBR annotation: ribosomal protein, putative, expressed

Blast result AT5G59240 : 1.10E-95
Blast annotation: Ribosomal protein S8e family protein

2.Location

Scaffold: PH01002260
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001233	Ribosome translation, structural constituent of ribosome, intracellular, Ribosome mitochondrial proton-transporting ATP synthase complex, coupling factor F(o), ATP synthesis coupled proton transport, small ribosomal subunit, rRNA binding, hydrogen ion transmembrane transporter activity, Oxidative_phosphorylation

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF01201.21	Ribosomal_S8e	1	199

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Ribosome	small subunit ribosomal protein S8e	ko03011	K02995

10.Gene Ontology

GO Accession	GO Annotation
GO:0003735	structural constituent of ribosome
GO:0005622	intracellular
GO:0005840	ribosome
GO:0006412	translation

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

    © 2017 All Rights Reserved.