PH01002299G0310's details annotation
1.Annotation
ICBR annotation: acetyltransferase, GNAT family, putative, expressed
Blast result AT2G06025 : 3.40E-17
Blast annotation: Acyl-CoA N-acyltransferases (NAT) superfamily protein
2.Location
Scaffold: PH01002299
Strand: +
| Region | Start | End |
| gene | 208649 | 213405 |
| mRNA | 208649 | 213405 |
| exon | 208649 | 209534 |
| exon | 210195 | 210462 |
| exon | 211132 | 211184 |
| exon | 211308 | 211344 |
| exon | 211493 | 211659 |
| exon | 212729 | 212916 |
| exon | 213099 | 213405 |
| CDS | 209434 | 209534 |
| CDS | 210195 | 210462 |
| CDS | 211132 | 211184 |
| CDS | 211308 | 211344 |
| CDS | 211493 | 211659 |
| CDS | 212729 | 212916 |
| CDS | 213099 | 213211 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.