PH01002312G0230's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G19380 : 1.50E-63
Blast annotation: CRT (chloroquine-resistance transporter)-like transporter 1
2.Location
Scaffold: PH01002312
Strand: +
| Region | Start | End |
| gene | 149083 | 155448 |
| mRNA | 149083 | 155448 |
| exon | 149083 | 149534 |
| exon | 153595 | 153740 |
| exon | 154055 | 154092 |
| exon | 154187 | 154302 |
| exon | 154952 | 155051 |
| exon | 155142 | 155177 |
| exon | 155331 | 155448 |
| CDS | 149410 | 149534 |
| CDS | 153595 | 153740 |
| CDS | 154055 | 154092 |
| CDS | 154187 | 154302 |
| CDS | 154952 | 155051 |
| CDS | 155142 | 155177 |
| CDS | 155331 | 155393 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08627.9 | CRT-like | 6 | 181 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.