PH01002335G0210's details annotation
1.Annotation
ICBR annotation: DnaK family protein, putative, expressed
Blast result AT5G02500 : 0
Blast annotation: heat shock cognate protein 70-1
2.Location
Scaffold: PH01002335
Strand: -
| Region | Start | End |
| gene | 147975 | 152631 |
| mRNA | 147975 | 152631 |
| exon | 147975 | 150275 |
| exon | 152289 | 152631 |
| CDS | 148543 | 150275 |
| CDS | 152289 | 152505 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00012.19 | HSP70 | 10 | 619 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Spliceosome | heat shock 70kDa protein 1/8 | ko03041 | K03283 |
| Protein processing in endoplasmic reticulum | heat shock 70kDa protein 1/8 | ko04141 | K03283 |
| Endocytosis | heat shock 70kDa protein 1/8 | ko04144 | K03283 |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.