PH01002344G0040's details annotation
1.Annotation
ICBR annotation: glycosyltransferase family protein 1, putative, expressed
Blast result AT4G01210 : 0.00E+00
Blast annotation: glycosyl transferase family 1 protein
2.Location
Scaffold: PH01002344
Strand: +
| Region | Start | End |
| gene | 13881 | 24163 |
| mRNA | 13881 | 24163 |
| exon | 13881 | 15210 |
| exon | 15312 | 15398 |
| exon | 15508 | 15547 |
| exon | 15717 | 15815 |
| exon | 16697 | 16722 |
| exon | 17319 | 17428 |
| exon | 17582 | 17632 |
| exon | 17739 | 17910 |
| exon | 18024 | 18344 |
| exon | 18457 | 18657 |
| exon | 18768 | 19256 |
| exon | 19347 | 19467 |
| exon | 20327 | 20505 |
| exon | 20776 | 20939 |
| exon | 21250 | 21408 |
| exon | 22822 | 22900 |
| exon | 23250 | 24163 |
| CDS | 14992 | 15210 |
| CDS | 15312 | 15398 |
| CDS | 15508 | 15547 |
| CDS | 15717 | 15815 |
| CDS | 16697 | 16722 |
| CDS | 17319 | 17428 |
| CDS | 17582 | 17632 |
| CDS | 17739 | 17910 |
| CDS | 18024 | 18344 |
| CDS | 18457 | 18657 |
| CDS | 18768 | 19256 |
| CDS | 19347 | 19467 |
| CDS | 20327 | 20505 |
| CDS | 20776 | 20939 |
| CDS | 21250 | 21408 |
| CDS | 22822 | 22900 |
| CDS | 23250 | 23693 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00534.19 | Glycos_transf_1 | 336 | 474 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0009058 | biosynthetic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.