PH01002350G0170's details annotation
1.Annotation
ICBR annotation: calmodulin-binding heat-shock protein, putative, expressed
Blast result AT3G49050 : 7.00E-170
Blast annotation: alpha/beta-Hydrolases superfamily protein
2.Location
Scaffold: PH01002350
Strand: +
| Region | Start | End |
| gene | 126188 | 130728 |
| mRNA | 126188 | 130728 |
| exon | 126188 | 128168 |
| exon | 128269 | 128327 |
| exon | 129315 | 129443 |
| exon | 129921 | 130056 |
| exon | 130338 | 130728 |
| CDS | 127464 | 128168 |
| CDS | 128269 | 128327 |
| CDS | 129315 | 129443 |
| CDS | 129921 | 130056 |
| CDS | 130338 | 130652 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03893.15 | Lipase3_N | 9 | 74 |
| PF01764.24 | Lipase_3 | 109 | 243 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004091 | carboxylesterase activity |
| GO:0004806 | triglyceride lipase activity |
| GO:0006629 | lipid metabolic process |
| GO:0016042 | lipid catabolic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.