PH01002461G0100's details annotation
1.Annotation
ICBR annotation: snRK1-interacting protein 1, putative, expressed
Blast result AT5G47870 : 7.10E-49
Blast annotation: -
2.Location
Scaffold: PH01002461
Strand: -
| Region | Start | End |
| gene | 48037 | 52380 |
| mRNA | 48037 | 52380 |
| exon | 48037 | 48580 |
| exon | 48836 | 48927 |
| exon | 49536 | 49573 |
| exon | 51194 | 52380 |
| CDS | 48434 | 48580 |
| CDS | 48836 | 48927 |
| CDS | 49536 | 49573 |
| CDS | 51194 | 51282 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.