PH01002535G0030's details annotation
1.Annotation
ICBR annotation: solute carrier family 35 member F1, putative, expressed
Blast result AT3G59310 : 7.00E-113
Blast annotation: Eukaryotic protein of unknown function (DUF914)
2.Location
Scaffold: PH01002535
Strand: -
| Region | Start | End |
| gene | 22679 | 31305 |
| mRNA | 22679 | 31305 |
| exon | 22679 | 23272 |
| exon | 23410 | 23546 |
| exon | 23752 | 23813 |
| exon | 23891 | 23977 |
| exon | 24171 | 24239 |
| exon | 24564 | 24615 |
| exon | 24845 | 24927 |
| exon | 25216 | 25292 |
| exon | 28586 | 28780 |
| exon | 28974 | 29031 |
| exon | 29867 | 29961 |
| exon | 30476 | 31305 |
| CDS | 23202 | 23272 |
| CDS | 23410 | 23546 |
| CDS | 23752 | 23813 |
| CDS | 23891 | 23977 |
| CDS | 24171 | 24239 |
| CDS | 24564 | 24615 |
| CDS | 24845 | 24927 |
| CDS | 25216 | 25292 |
| CDS | 28586 | 28780 |
| CDS | 28974 | 29031 |
| CDS | 29867 | 29961 |
| CDS | 30476 | 30599 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF06027.11 | SLC35F | 12 | 300 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.