PH01002582G0120's details annotation
1.Annotation
ICBR annotation: prefoldin, putative, expressed
Blast result AT5G23290 : 2.30E-56
Blast annotation: prefoldin 5
2.Location
Scaffold: PH01002582
Strand: -
| Region | Start | End |
| gene | 79615 | 83665 |
| mRNA | 79615 | 83665 |
| exon | 79615 | 80127 |
| exon | 81886 | 81963 |
| exon | 82547 | 82645 |
| exon | 82703 | 83665 |
| CDS | 80038 | 80127 |
| CDS | 81886 | 81963 |
| CDS | 82547 | 82645 |
| CDS | 82703 | 82930 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02996.16 | Prefoldin C | 27 | 140 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006457 | protein folding |
| GO:0016272 | prefoldin complex |
| GO:0051082 | unfolded protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.