PH01002724G0010's details annotation
1.Annotation
ICBR annotation: auxin-responsive protein, putative, expressed
Blast result AT3G61750 : 7.50E-46
Blast annotation: Cytochrome b561/ferric reductase transmembrane with DOMON related domain
2.Location
Scaffold: PH01002724
Strand: +
| Region | Start | End |
| gene | 543 | 4397 |
| mRNA | 543 | 4397 |
| exon | 543 | 1194 |
| exon | 3107 | 3390 |
| exon | 3608 | 4397 |
| CDS | 1173 | 1194 |
| CDS | 3107 | 3390 |
| CDS | 3608 | 3970 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03188.15 | Cytochrom_B561 | 49 | 143 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016021 | integral to membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.