PH01002755G0250's details annotation
1.Annotation
ICBR annotation: integral membrane protein DUF6 containing protein, expressed
Blast result AT5G64700 : 2.70E-33
Blast annotation: nodulin MtN21 /EamA-like transporter family protein
2.Location
Scaffold: PH01002755
Strand: -
| Region | Start | End |
| gene | 155641 | 157608 |
| mRNA | 155641 | 157608 |
| exon | 155641 | 156248 |
| exon | 156466 | 156617 |
| exon | 156752 | 156910 |
| exon | 156984 | 157608 |
| CDS | 156041 | 156248 |
| CDS | 156466 | 156617 |
| CDS | 156752 | 156910 |
| CDS | 156984 | 157154 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00892.19 | EamA | 38 | 175 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.