PH01002770G0070's details annotation
1.Annotation
ICBR annotation: aspartic proteinase nepenthesin-2 precursor, putative, expressed
Blast result AT5G10770 : 1.30E-79
Blast annotation: Eukaryotic aspartyl protease family protein
2.Location
Scaffold: PH01002770
Strand: +
| Region | Start | End |
| gene | 39784 | 45724 |
| mRNA | 39784 | 45724 |
| exon | 39784 | 43711 |
| exon | 43955 | 45724 |
| CDS | 43681 | 43711 |
| CDS | 43955 | 45240 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF14543.5 | TAXi_N | 125 | 293 |
| PF14541.5 | TAXi_C | 313 | 455 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004190 | aspartic-type endopeptidase activity |
| GO:0006508 | proteolysis |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.