PH01002954G0090's details annotation
1.Annotation
ICBR annotation: ZOS9-21 - C2H2 zinc finger protein, expressed
Blast result AT4G25610 : 6.30E-40
Blast annotation: C2H2-like zinc finger protein
2.Location
Scaffold: PH01002954
Strand: -
| Region | Start | End |
| gene | 53430 | 60550 |
| mRNA | 53430 | 60550 |
| exon | 53430 | 55490 |
| exon | 55635 | 55720 |
| exon | 55824 | 55910 |
| exon | 56119 | 56223 |
| exon | 56324 | 56377 |
| exon | 56727 | 56771 |
| exon | 57450 | 57484 |
| exon | 57600 | 60550 |
| CDS | 54548 | 55490 |
| CDS | 55635 | 55720 |
| CDS | 55824 | 55910 |
| CDS | 56119 | 56223 |
| CDS | 56324 | 56377 |
| CDS | 56727 | 56771 |
| CDS | 57450 | 57484 |
| CDS | 57600 | 57696 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.