PH01003000G0060's details annotation
1.Annotation
ICBR annotation: nicotinate phosphoribosyltransferase family domain containing protein, expressed
Blast result AT4G36940 : 1.10E-57
Blast annotation: nicotinate phosphoribosyltransferase 1
2.Location
Scaffold: PH01003000
Strand: +
| Region | Start | End |
| gene | 55427 | 59006 |
| mRNA | 55427 | 59006 |
| exon | 55427 | 56544 |
| exon | 57719 | 57863 |
| exon | 58177 | 58296 |
| exon | 58420 | 59006 |
| CDS | 56204 | 56544 |
| CDS | 57719 | 57863 |
| CDS | 58177 | 58296 |
| CDS | 58420 | 58608 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.