PH01003021G0130's details annotation
1.Annotation
ICBR annotation: methyltransferase, putative, expressed
Blast result AT2G26200 : 4.90E-75
Blast annotation: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
2.Location
Scaffold: PH01003021
Strand: -
| Region | Start | End |
| gene | 97545 | 102604 |
| mRNA | 97545 | 102604 |
| exon | 97545 | 99017 |
| exon | 99083 | 99476 |
| exon | 100131 | 100324 |
| exon | 100926 | 100998 |
| exon | 101130 | 101192 |
| exon | 101427 | 101477 |
| exon | 101579 | 101631 |
| exon | 102360 | 102604 |
| CDS | 98785 | 99017 |
| CDS | 99083 | 99476 |
| CDS | 100131 | 100324 |
| CDS | 100926 | 100998 |
| CDS | 101130 | 101192 |
| CDS | 101427 | 101477 |
| CDS | 101579 | 101631 |
| CDS | 102360 | 102531 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.