PH01003119G0190's details annotation
1.Annotation
ICBR annotation: heat shock protein DnaJ, putative, expressed
Blast result AT2G26890 : 1.40E-27
Blast annotation: DNAJ heat shock N-terminal domain-containing protein
2.Location
Scaffold: PH01003119
Strand: -
| Region | Start | End |
| gene | 114596 | 116364 |
| mRNA | 114596 | 116364 |
| exon | 114596 | 115439 |
| exon | 115589 | 115657 |
| exon | 116039 | 116364 |
| CDS | 115212 | 115439 |
| CDS | 115589 | 115657 |
| CDS | 116039 | 116209 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001156 | single-stranded DNA binding, DNA_replication |
| coexpression network | CFinderM001300 | regulation of actin filament polymerization, HD-ZIP Transcription_Regulator(from PlantTFDB) SBP Transcription_Regulator(from PlantTFDB) HB-HD-ZIP Transcription_Regulator(from iTAK) cytoskeleton, molybdenum ion binding, |
| coexpression network | CFinderM001884 | single-stranded DNA binding, DNA_replication RNA processing, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.