PH01003299G0140's details annotation
1.Annotation
ICBR annotation: kinesin motor protein-related, putative, expressed
Blast result AT3G10180 : 1.50E-66
Blast annotation: P-loop containing nucleoside triphosphate hydrolases superfamily protein
2.Location
Scaffold: PH01003299
Strand: -
| Region | Start | End |
| gene | 93647 | 100013 |
| mRNA | 93647 | 100013 |
| exon | 93647 | 93874 |
| exon | 93983 | 94072 |
| exon | 94175 | 94381 |
| exon | 94981 | 95148 |
| exon | 95261 | 95464 |
| exon | 95724 | 95837 |
| exon | 96664 | 96813 |
| exon | 96978 | 97067 |
| exon | 97666 | 97770 |
| exon | 97847 | 98017 |
| exon | 98302 | 98355 |
| exon | 98558 | 100013 |
| CDS | 93689 | 93874 |
| CDS | 93983 | 94072 |
| CDS | 94175 | 94381 |
| CDS | 94981 | 95148 |
| CDS | 95261 | 95464 |
| CDS | 95724 | 95837 |
| CDS | 96664 | 96813 |
| CDS | 96978 | 97067 |
| CDS | 97666 | 97770 |
| CDS | 97847 | 98017 |
| CDS | 98302 | 98355 |
| CDS | 98558 | 98578 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.