PH01003299G0150's details annotation
1.Annotation
ICBR annotation: kinesin motor protein-related, putative, expressed
Blast result AT3G10180 : 1.00E-169
Blast annotation: P-loop containing nucleoside triphosphate hydrolases superfamily protein
2.Location
Scaffold: PH01003299
Strand: -
| Region | Start | End |
| gene | 101055 | 109779 |
| mRNA | 101055 | 109779 |
| exon | 101055 | 101424 |
| exon | 101872 | 101976 |
| exon | 102863 | 102964 |
| exon | 103308 | 103325 |
| exon | 103356 | 103412 |
| exon | 103637 | 103798 |
| exon | 104014 | 104082 |
| exon | 104173 | 104253 |
| exon | 105320 | 105422 |
| exon | 105509 | 105654 |
| exon | 106027 | 106101 |
| exon | 106176 | 106243 |
| exon | 106320 | 106401 |
| exon | 106501 | 106614 |
| exon | 107619 | 107732 |
| exon | 108001 | 108119 |
| exon | 109249 | 109338 |
| exon | 109431 | 109779 |
| CDS | 101308 | 101424 |
| CDS | 101872 | 101976 |
| CDS | 102863 | 102964 |
| CDS | 103308 | 103325 |
| CDS | 103356 | 103412 |
| CDS | 103637 | 103798 |
| CDS | 104014 | 104082 |
| CDS | 104173 | 104253 |
| CDS | 105320 | 105422 |
| CDS | 105509 | 105654 |
| CDS | 106027 | 106101 |
| CDS | 106176 | 106243 |
| CDS | 106320 | 106401 |
| CDS | 106501 | 106614 |
| CDS | 107619 | 107732 |
| CDS | 108001 | 108119 |
| CDS | 109249 | 109338 |
| CDS | 109431 | 109557 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF16796.4 | Microtub_bd | 33 | 136 |
| PF00225.22 | Kinesin | 146 | 363 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003777 | microtubule motor activity |
| GO:0005524 | ATP binding |
| GO:0005875 | microtubule associated complex |
| GO:0007018 | microtubule-based movement |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.