PH01003373G0190's details annotation
1.Annotation
ICBR annotation: ATP-binding region, ATPase-like domain containing protein, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01003373
Strand: +
| Region | Start | End |
| gene | 143993 | 145149 |
| mRNA | 143993 | 145149 |
| exon | 143993 | 144069 |
| exon | 144143 | 144218 |
| exon | 144684 | 144806 |
| exon | 144931 | 145149 |
| CDS | 144050 | 144069 |
| CDS | 144143 | 144218 |
| CDS | 144684 | 144806 |
| CDS | 144931 | 144999 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000840 | vesicle docking involved in exocytosis, RNA modification, pseudouridine synthesis, translational initiation, RNA_transport pseudouridine synthase activity, translation initiation factor activity, vesicle-mediated transport, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.