PH01003380G0080's details annotation
1.Annotation
ICBR annotation: OsFBX230 - F-box domain containing protein, expressed
Blast result AT3G23880 : 4.20E-10
Blast annotation: F-box and associated interaction domains-containing protein
2.Location
Scaffold: PH01003380
Strand: -
| Region | Start | End |
| gene | 49310 | 51571 |
| mRNA | 49310 | 51571 |
| exon | 49310 | 51571 |
| CDS | 50026 | 51216 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12937.6 | F-box-like | 23 | 57 |
| PF08268.11 | FBA_3 | 218 | 349 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.