PH01003382G0180's details annotation
1.Annotation
ICBR annotation: rho GDP-dissociation inhibitor 1, putative, expressed
Blast result AT3G07880 : 7.00E-39
Blast annotation: Immunoglobulin E-set superfamily protein
2.Location
Scaffold: PH01003382
Strand: +
| Region | Start | End |
| gene | 113225 | 116755 |
| mRNA | 113225 | 116755 |
| exon | 113225 | 113989 |
| exon | 114724 | 114823 |
| exon | 114919 | 115043 |
| exon | 115140 | 116755 |
| CDS | 113714 | 113989 |
| CDS | 114724 | 114823 |
| CDS | 114919 | 115043 |
| CDS | 115140 | 115217 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02115.16 | Rho_GDI | 92 | 188 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005094 | Rho GDP-dissociation inhibitor activity |
| GO:0005737 | cytoplasm |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.