PH01003422G0200's details annotation
1.Annotation
ICBR annotation: ad-003, putative, expressed
Blast result AT5G44450 : 3.60E-93
Blast annotation: methyltransferases
2.Location
Scaffold: PH01003422
Strand: +
| Region | Start | End |
| gene | 118244 | 121322 |
| mRNA | 118244 | 121322 |
| exon | 118244 | 118799 |
| exon | 118905 | 119043 |
| exon | 119520 | 119710 |
| exon | 119804 | 119905 |
| exon | 120557 | 120721 |
| exon | 121088 | 121322 |
| CDS | 118653 | 118799 |
| CDS | 118905 | 119043 |
| CDS | 119520 | 119710 |
| CDS | 119804 | 119905 |
| CDS | 120557 | 120721 |
| CDS | 121088 | 121114 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05891.11 | Methyltransf_PK | 63 | 283 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008168 | methyltransferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.