PH01003429G0140's details annotation
1.Annotation
ICBR annotation: prenylated rab acceptor, putative, expressed
Blast result AT1G55190 : 1.40E-35
Blast annotation: PRA1 (Prenylated rab acceptor) family protein
2.Location
Scaffold: PH01003429
Strand: +
| Region | Start | End |
| gene | 93392 | 94942 |
| mRNA | 93392 | 94942 |
| exon | 93392 | 94942 |
| CDS | 94255 | 94815 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001044 | |
| coexpression network | CFinderM001209 | Lysine_biosynthesis dihydrodipicolinate synthase activity, lysine biosynthetic process via diaminopimelate, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03208.18 | PRA1 | 39 | 177 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.