PH01003475G0030's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G73390 : 9.40E-72
Blast annotation: Endosomal targeting BRO1-like domain-containing protein
2.Location
Scaffold: PH01003475
Strand: +
| Region | Start | End |
| gene | 28297 | 30605 |
| mRNA | 28297 | 30605 |
| exon | 28297 | 29412 |
| exon | 29510 | 29584 |
| exon | 29663 | 29760 |
| exon | 29812 | 29947 |
| exon | 30087 | 30183 |
| exon | 30272 | 30338 |
| exon | 30524 | 30605 |
| CDS | 29160 | 29412 |
| CDS | 29510 | 29584 |
| CDS | 29663 | 29760 |
| CDS | 29812 | 29947 |
| CDS | 30087 | 30183 |
| CDS | 30272 | 30338 |
| CDS | 30524 | 30538 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.