PH01003499G0040's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT3G16200 : 1.00E-174
Blast annotation: -
2.Location
Scaffold: PH01003499
Strand: +
| Region | Start | End |
| gene | 13989 | 20450 |
| mRNA | 13989 | 20450 |
| exon | 13989 | 14474 |
| exon | 15855 | 16304 |
| exon | 17024 | 17468 |
| exon | 17680 | 17795 |
| exon | 19870 | 20450 |
| CDS | 14420 | 14474 |
| CDS | 15855 | 16304 |
| CDS | 17024 | 17468 |
| CDS | 17680 | 17795 |
| CDS | 19870 | 20300 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.