PH01003541G0100's details annotation
1.Annotation
ICBR annotation: cytochrome P450, putative, expressed
Blast result AT3G48520 : 3.00E-150
Blast annotation: cytochrome P450, family 94, subfamily B, polypeptide 3
2.Location
Scaffold: PH01003541
Strand: +
| Region | Start | End |
| gene | 53087 | 53913 |
| mRNA | 53087 | 53913 |
| exon | 53087 | 53913 |
| CDS | 53191 | 53913 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000228 | Arp2/3_protein_complex Arp2/3_complex-mediated_actin_nucleation regulation of actin filament polymerization, cytoskeleton, clathrin_coat ARF Transcription_Regulator(from PlantTFDB) B3-ARF Transcription_Regulator(from iTAK) clathrin_coat_assembly response to hormone stimulus, 1-phosphatidylinositol_binding clathrin_binding |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00067.21 | p450 | 30 | 488 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005506 | iron ion binding |
| GO:0009055 | electron carrier activity |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.