PH01003554G0180's details annotation
1.Annotation
ICBR annotation: STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
Blast result AT5G14720 : 0.00E+00
Blast annotation: Protein kinase superfamily protein
2.Location
Scaffold: PH01003554
Strand: -
| Region | Start | End |
| gene | 125414 | 140717 |
| mRNA | 125414 | 140717 |
| exon | 125414 | 126783 |
| exon | 126988 | 127039 |
| exon | 127116 | 127177 |
| exon | 127375 | 127409 |
| exon | 127506 | 127548 |
| exon | 127619 | 127744 |
| exon | 130942 | 131024 |
| exon | 131238 | 131329 |
| exon | 132175 | 132444 |
| exon | 133056 | 133132 |
| exon | 133226 | 133360 |
| exon | 134145 | 134210 |
| exon | 134283 | 134453 |
| exon | 134527 | 134595 |
| exon | 134687 | 134768 |
| exon | 134860 | 134904 |
| exon | 135047 | 135171 |
| exon | 136598 | 136852 |
| exon | 137994 | 140717 |
| CDS | 126715 | 126783 |
| CDS | 126988 | 127039 |
| CDS | 127116 | 127177 |
| CDS | 127375 | 127409 |
| CDS | 127506 | 127548 |
| CDS | 127619 | 127744 |
| CDS | 130942 | 131024 |
| CDS | 131238 | 131329 |
| CDS | 132175 | 132444 |
| CDS | 133056 | 133132 |
| CDS | 133226 | 133360 |
| CDS | 134145 | 134210 |
| CDS | 134283 | 134453 |
| CDS | 134527 | 134595 |
| CDS | 134687 | 134768 |
| CDS | 134860 | 134904 |
| CDS | 135047 | 135171 |
| CDS | 136598 | 136852 |
| CDS | 137994 | 138164 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00069.24 | Pkinase | 17 | 278 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.