PH01003721G0150's details annotation
1.Annotation
ICBR annotation: cycloartenol synthase, putative, expressed
Blast result AT2G07050 : 4.30E-59
Blast annotation: cycloartenol synthase 1
2.Location
Scaffold: PH01003721
Strand: +
| Region | Start | End |
| gene | 110871 | 116801 |
| mRNA | 110871 | 116801 |
| exon | 110871 | 111492 |
| exon | 114502 | 114548 |
| exon | 114650 | 114793 |
| exon | 114881 | 115058 |
| exon | 115862 | 115936 |
| exon | 116047 | 116130 |
| exon | 116239 | 116801 |
| CDS | 111472 | 111492 |
| CDS | 114502 | 114548 |
| CDS | 114650 | 114793 |
| CDS | 114881 | 115058 |
| CDS | 115862 | 115936 |
| CDS | 116047 | 116130 |
| CDS | 116239 | 116244 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13243.5 | SQHop_cyclase_C | 17 | 178 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0016866 | intramolecular transferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.