PH01003742G0020's details annotation
1.Annotation
ICBR annotation: peptidyl-prolyl cis-trans isomerase, putative, expressed
Blast result AT2G18040 : 3.10E-14
Blast annotation: peptidylprolyl cis/trans isomerase, NIMA-interacting 1
2.Location
Scaffold: PH01003742
Strand: +
| Region | Start | End |
| gene | 7686 | 9518 |
| mRNA | 7686 | 9518 |
| exon | 7686 | 7822 |
| exon | 9127 | 9518 |
| CDS | 7765 | 7822 |
| CDS | 9127 | 9251 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00639.20 | Rotamase | 14 | 59 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016853 | isomerase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.