Gene details

Annotation of co-expression genes

PH01003742G0040's details annotation

1.Annotation

ICBR annotation: tRNA-dihydrouridine synthase 3-like, putative, expressed

Blast result AT4G38890 : 0.00E+00
Blast annotation: FMN-linked oxidoreductases superfamily protein

2.Location

Scaffold: PH01003742
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	null	null

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
Transcription_Regulator(from iTAK)	C3H
Transcription_Regulator(from PlantTFDB)	C3H

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF01207.16	Dus	336	596

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003676	nucleic acid binding
GO:0003824	catalytic activity
GO:0008033	tRNA processing
GO:0008270	zinc ion binding
GO:0017150	tRNA dihydrouridine synthase activity
GO:0050660	flavin adenine dinucleotide binding
GO:0055114	oxidation-reduction process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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