PH01003906G0040's details annotation
1.Annotation
ICBR annotation: protein kinase, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01003906
Strand: -
| Region | Start | End |
| gene | 15086 | 18129 |
| mRNA | 15086 | 18129 |
| exon | 15086 | 16957 |
| exon | 17005 | 18129 |
| CDS | 16610 | 16957 |
| CDS | 17005 | 17694 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000021 | AGC_RSK-2 (from iTAK) Pentose_and_glucuronate_interconversions Retinol_metabolism Drug_metabolism_-_other_enzymes Metabolism_of_xenobiotics_by_cytochrome_P450 Ascorbate_and_aldarate_metabolism Steroid_hormone_biosynthesis Drug_metabolism_-_cytochrome_P450 Porphyrin_and_chlorophyll_metabolism |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00069.24 | Pkinase | 141 | 194 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.