PH01003953G0090's details annotation
1.Annotation
ICBR annotation: kinesin motor domain containing protein, putative, expressed
Blast result AT5G27950 : 6.50E-83
Blast annotation: P-loop containing nucleoside triphosphate hydrolases superfamily protein
2.Location
Scaffold: PH01003953
Strand: -
| Region | Start | End |
| gene | 94411 | 98864 |
| mRNA | 94411 | 98864 |
| exon | 94411 | 94981 |
| exon | 95556 | 95685 |
| exon | 96004 | 96054 |
| exon | 96298 | 96728 |
| exon | 96817 | 96944 |
| exon | 97034 | 97071 |
| exon | 97179 | 97388 |
| exon | 97489 | 97653 |
| exon | 97927 | 98864 |
| CDS | 94610 | 94981 |
| CDS | 95556 | 95685 |
| CDS | 96004 | 96054 |
| CDS | 96298 | 96728 |
| CDS | 96817 | 96944 |
| CDS | 97034 | 97071 |
| CDS | 97179 | 97388 |
| CDS | 97489 | 97653 |
| CDS | 97927 | 97946 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00225.22 | Kinesin | 9 | 179 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003777 | microtubule motor activity |
| GO:0005524 | ATP binding |
| GO:0005875 | microtubule associated complex |
| GO:0007018 | microtubule-based movement |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.