PH01004121G0170's details annotation
1.Annotation
ICBR annotation: hydrolase, NUDIX family, domain containing protein, expressed
Blast result AT3G46200 : 7.50E-82
Blast annotation: nudix hydrolase homolog 9
2.Location
Scaffold: PH01004121
Strand: -
| Region | Start | End |
| gene | 105765 | 111684 |
| mRNA | 105765 | 111684 |
| exon | 105765 | 105939 |
| exon | 106069 | 106227 |
| exon | 106461 | 106598 |
| exon | 107996 | 108144 |
| exon | 108571 | 108629 |
| exon | 108779 | 108861 |
| exon | 109401 | 109457 |
| exon | 110206 | 111684 |
| CDS | 105856 | 105939 |
| CDS | 106069 | 106227 |
| CDS | 106461 | 106598 |
| CDS | 107996 | 108144 |
| CDS | 108571 | 108629 |
| CDS | 108779 | 108861 |
| CDS | 109401 | 109457 |
| CDS | 110206 | 110355 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016787 | hydrolase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.