PH01004211G0150's details annotation
1.Annotation
ICBR annotation: PPR repeat containing protein
Blast result AT2G22860 : 9.40E-08
Blast annotation: phytosulfokine 2 precursor
2.Location
Scaffold: PH01004211
Strand: -
| Region | Start | End |
| gene | 93757 | 94401 |
| mRNA | 93757 | 94401 |
| exon | 93757 | 93988 |
| exon | 94195 | 94401 |
| CDS | 93803 | 93988 |
| CDS | 94195 | 94338 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF06404.11 | PSK | 18 | 109 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005576 | extracellular region |
| GO:0008083 | growth factor activity |
| GO:0008283 | cell proliferation |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.