Annotation of co-expression genes

PH01004289G0040's details annotation

1.Annotation

ICBR annotation: DUF623 domain containing protein, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01004289
Strand: +

RegionStartEnd
gene3608637478
mRNA3608637478
exon3608636784
exon3692037044
exon3712037478
CDS3629136784
CDS3692037044
CDS3712037256

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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