PH01004617G0060's details annotation
1.Annotation
ICBR annotation: GEM, putative, expressed
Blast result AT5G23370 : 3.40E-50
Blast annotation: GRAM domain-containing protein / ABA-responsive protein-related
2.Location
Scaffold: PH01004617
Strand: +
| Region | Start | End |
| gene | 60851 | 65845 |
| mRNA | 60851 | 65845 |
| exon | 60851 | 61121 |
| exon | 61223 | 61306 |
| exon | 61424 | 65845 |
| CDS | 60980 | 61121 |
| CDS | 61223 | 61306 |
| CDS | 61424 | 61875 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02893.19 | GRAM | 104 | 223 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.