PH01004618G0110's details annotation
1.Annotation
ICBR annotation: hydrolase, alpha/beta fold family protein, putative, expressed
Blast result AT5G21950 : 8.90E-28
Blast annotation: alpha/beta-Hydrolases superfamily protein
2.Location
Scaffold: PH01004618
Strand: -
| Region | Start | End |
| gene | 55359 | 58468 |
| mRNA | 55359 | 58468 |
| exon | 55359 | 55584 |
| exon | 55835 | 55902 |
| exon | 56072 | 56164 |
| exon | 56957 | 57309 |
| exon | 57511 | 58468 |
| CDS | 55440 | 55584 |
| CDS | 55835 | 55902 |
| CDS | 56072 | 56164 |
| CDS | 56957 | 57309 |
| CDS | 57511 | 57619 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12697.6 | Abhydrolase_6 | 26 | 236 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.