PH01004654G0090's details annotation
1.Annotation
ICBR annotation: RING finger protein 13, putative, expressed
Blast result AT1G71980 : 2.90E-28
Blast annotation: Protease-associated (PA) RING/U-box zinc finger family protein
2.Location
Scaffold: PH01004654
Strand: -
| Region | Start | End |
| gene | 74387 | 79472 |
| mRNA | 74387 | 79472 |
| exon | 74387 | 76037 |
| exon | 77339 | 77563 |
| exon | 77769 | 79472 |
| CDS | 75265 | 76037 |
| CDS | 77339 | 77563 |
| CDS | 77769 | 77850 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02225.21 | PA | 64 | 97 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.