PH01004673G0050's details annotation
1.Annotation
ICBR annotation: esterase, putative, expressed
Blast result AT1G33990 : 5.00E-114
Blast annotation: methyl esterase 14
2.Location
Scaffold: PH01004673
Strand: +
| Region | Start | End |
| gene | 24067 | 27375 |
| mRNA | 24067 | 27375 |
| exon | 24067 | 24452 |
| exon | 24684 | 24794 |
| exon | 26058 | 26297 |
| exon | 26377 | 26520 |
| exon | 26600 | 26734 |
| exon | 26853 | 27375 |
| CDS | 24306 | 24452 |
| CDS | 24684 | 24794 |
| CDS | 26058 | 26297 |
| CDS | 26377 | 26520 |
| CDS | 26600 | 26734 |
| CDS | 26853 | 27185 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001703 | Endocytosis regulation of ARF GTPase activity, ARF GTPase activator activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12697.6 | Abhydrolase_6 | 99 | 338 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.