PH01004691G0100's details annotation
1.Annotation
ICBR annotation: parafibromin, putative, expressed
Blast result AT3G22590 : 5.40E-81
Blast annotation: PLANT HOMOLOGOUS TO PARAFIBROMIN
2.Location
Scaffold: PH01004691
Strand: +
| Region | Start | End |
| gene | 68309 | 70317 |
| mRNA | 68309 | 70317 |
| exon | 68309 | 69380 |
| exon | 70133 | 70317 |
| CDS | 68432 | 69380 |
| CDS | 70133 | 70230 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF16050.4 | CDC73_N | 2 | 95 |
| PF05179.13 | CDC73_C | 206 | 346 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.