PH01004759G0100's details annotation
1.Annotation
ICBR annotation: phospholipase C, putative, expressed
Blast result AT5G67130 : 5.50E-79
Blast annotation: PLC-like phosphodiesterases superfamily protein
2.Location
Scaffold: PH01004759
Strand: -
| Region | Start | End |
| gene | 42195 | 44599 |
| mRNA | 42195 | 44599 |
| exon | 42195 | 42884 |
| exon | 43222 | 43320 |
| exon | 43421 | 43558 |
| exon | 44065 | 44599 |
| CDS | 42504 | 42884 |
| CDS | 43222 | 43320 |
| CDS | 43421 | 43558 |
| CDS | 44065 | 44136 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006629 | lipid metabolic process |
| GO:0008081 | phosphoric diester hydrolase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.