PH01004890G0070's details annotation
1.Annotation
ICBR annotation: natural resistance-associated macrophage protein, putative, expressed
Blast result AT2G23150 : 6.00E-179
Blast annotation: natural resistance-associated macrophage protein 3
2.Location
Scaffold: PH01004890
Strand: -
| Region | Start | End |
| gene | 36679 | 42163 |
| mRNA | 36679 | 42163 |
| exon | 36679 | 37584 |
| exon | 38083 | 38367 |
| exon | 38924 | 39576 |
| exon | 39668 | 39804 |
| exon | 41504 | 42163 |
| CDS | 37378 | 37584 |
| CDS | 38083 | 38367 |
| CDS | 38924 | 39576 |
| CDS | 39668 | 39804 |
| CDS | 41504 | 42084 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01566.17 | Nramp | 91 | 453 |
| PF01566.17 | Nramp | 458 | 548 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005215 | transporter activity |
| GO:0006810 | transport |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.