Annotation of co-expression genes

PH01004902G0030's details annotation

1.Annotation

ICBR annotation: cytokinin-O-glucosyltransferase 3, putative

Blast result AT2G36770 : 1.90E-27
Blast annotation: UDP-Glycosyltransferase superfamily protein

2.Location

Scaffold: PH01004902
Strand: +

RegionStartEnd
gene3057533835
mRNA3057533835
exon3057531243
exon3240633835
CDS3114231243
CDS3240632786

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
GO:0008152metabolic process
GO:0016758transferase activity, transferring hexosyl groups

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.