PH01004998G0050's details annotation
1.Annotation
ICBR annotation: DUF630/DUF632 domains containing protein, putative, expressed
Blast result AT1G21740 : 8.70E-46
Blast annotation: Protein of unknown function (DUF630 and DUF632)
2.Location
Scaffold: PH01004998
Strand: +
| Region | Start | End |
| gene | 23639 | 30820 |
| mRNA | 23639 | 30820 |
| exon | 23639 | 26285 |
| exon | 28130 | 28247 |
| exon | 28298 | 28874 |
| exon | 30708 | 30820 |
| CDS | 25412 | 26285 |
| CDS | 28130 | 28247 |
| CDS | 28298 | 28874 |
| CDS | 30708 | 30755 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04782.11 | DUF632 | 252 | 292 |
| PF04782.11 | DUF632 | 332 | 407 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.