PH01005032G0130's details annotation
1.Annotation
ICBR annotation: CBS domain-containing protein, putative, expressed
Blast result AT3G52950 : 2.50E-40
Blast annotation: CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein
2.Location
Scaffold: PH01005032
Strand: +
| Region | Start | End |
| gene | 64652 | 68219 |
| mRNA | 64652 | 68219 |
| exon | 64652 | 66190 |
| exon | 66422 | 66531 |
| exon | 66604 | 66731 |
| exon | 66856 | 66938 |
| exon | 67310 | 67399 |
| exon | 67506 | 68219 |
| CDS | 66155 | 66190 |
| CDS | 66422 | 66531 |
| CDS | 66604 | 66731 |
| CDS | 66856 | 66938 |
| CDS | 67310 | 67399 |
| CDS | 67506 | 67799 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00564.23 | PB1 | 75 | 157 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.