PH01005049G0060's details annotation
1.Annotation
ICBR annotation: kinesin motor domain containing protein, putative, expressed
Blast result AT3G19050 : 0.00E+00
Blast annotation: phragmoplast orienting kinesin 2
2.Location
Scaffold: PH01005049
Strand: +
| Region | Start | End |
| gene | 29093 | 42996 |
| mRNA | 29093 | 42996 |
| exon | 29093 | 29442 |
| exon | 29850 | 29895 |
| exon | 30457 | 31072 |
| exon | 31529 | 31684 |
| exon | 31763 | 31846 |
| exon | 31932 | 32051 |
| exon | 32187 | 32300 |
| exon | 32344 | 32481 |
| exon | 32580 | 32740 |
| exon | 33008 | 33095 |
| exon | 33182 | 33240 |
| exon | 33337 | 33400 |
| exon | 33638 | 33820 |
| exon | 34081 | 34185 |
| exon | 35258 | 35332 |
| exon | 36992 | 37048 |
| exon | 37151 | 37230 |
| exon | 37317 | 37443 |
| exon | 37575 | 38584 |
| exon | 38930 | 39065 |
| exon | 39216 | 39554 |
| exon | 39675 | 39764 |
| exon | 42095 | 42264 |
| exon | 42324 | 42996 |
| CDS | 29379 | 29442 |
| CDS | 29850 | 29895 |
| CDS | 30457 | 31072 |
| CDS | 31529 | 31684 |
| CDS | 31763 | 31846 |
| CDS | 31932 | 32051 |
| CDS | 32187 | 32300 |
| CDS | 32344 | 32481 |
| CDS | 32580 | 32740 |
| CDS | 33008 | 33095 |
| CDS | 33182 | 33240 |
| CDS | 33337 | 33400 |
| CDS | 33638 | 33820 |
| CDS | 34081 | 34185 |
| CDS | 35258 | 35332 |
| CDS | 36992 | 37048 |
| CDS | 37151 | 37230 |
| CDS | 37317 | 37443 |
| CDS | 37575 | 38584 |
| CDS | 38930 | 39065 |
| CDS | 39216 | 39554 |
| CDS | 39675 | 39764 |
| CDS | 42095 | 42264 |
| CDS | 42324 | 42687 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00225.22 | Kinesin | 246 | 500 |
| PF00225.22 | Kinesin | 502 | 567 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003777 | microtubule motor activity |
| GO:0005524 | ATP binding |
| GO:0005875 | microtubule associated complex |
| GO:0007018 | microtubule-based movement |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.